miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|29638649|gb|CB643658.1|CB643658 GACAAAGCTGGGTACCGGGCCCCCCCTCGAGATTTTTTCCTTTAATTTTTGATGTTTCTCCGTGACTACAGATATAACCC
TTTACATTACATTATATCACAGCAATATCGTTCATTGTCCCAAGTCAATCCCTTGTTGACTGTTACCCAAAAAAGTGAGA
AAAACAAAACATCTGGCCTGTCCATGAAAATTTACAATCGATGTATCACAATGCCTAACAAGGCTGTGCTTTTGATTGTA
AATAGATCTGTGTGAGCATGAATTGCGTTGCTACTCCCTCTTTTTCACAATGTAAGTCATTCTAACATTTCCCACATTCA
TATTGATGTTGATAAATCTACACATATATATCTATCTAGATTCATTAAATCAATATGAATGTGAGAAATGCAAGAATGAA
TTACATTATGAAACGGAGGAAGTACTACATAAGACATACTAGCAGACTAGCTTACCGTACAGCAGAAACTACACATTGTA
TATTTTCAACTAGAGAAAGGCGCAAGAAAAGAAAATGTCTAGAGCATAGTTATACAAAAATCACTTCAAGCTTTGCACAT
GGATGATCTTTAATGTATTTGTCAAGATCTGCGTCATCTCTAAATCTGAACTGGTATAATGCCTGACATTGTGTAAGGCC
GATTGGATAAATTTTGTATACCTTCAACTCGTCCCCACCTCTAATACTTGGTGGTCTTTCATCCTTCCACACAGGAACAT
GATTGAGCGATCTAAATTTAGCAAGCACAGCAGACTCCAAAGCACCCATAGTTAATTGGTCCGACCTCAGAAAAATGCTC
TCTGTCTTGAACCGCCCTCTTTCTCTGACAAACAAGTGGAATACCTTTCCTCTTTTGCTTG




Most similar to sp|Q9FX97|FUT12_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9FX97|FUT12_ARATH Putative fucosyltransferase-like protein
           OS=Arabidopsis thaliana GN=FUT12 PE=2 SV=1
          Length = 513

 Score =  136 bits (343), Expect = 2e-31
 Identities = 62/104 (59%), Positives = 83/104 (79%)
 Frame = -3

Query: 844 VFHLFVRERGRFKTESIFLRSDQLTMGALESAVLAKFRSLNHVPVWKDERPPSIRGGDEL 665
           V+H+FVRERGRF+ ES+FLR   +T  ALESAVLAKF+SL H  VWK ERP +++G  EL
Sbjct: 410 VYHVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKEL 469

Query: 664 KVYKIYPIGLTQCQALYQFRFRDDADLDKYIKDHPCAKLEVIFV 533
           K+++IYP+GLTQ QALY F+F  ++ L  +I+++PCAK EV+FV
Sbjct: 470 KIHRIYPLGLTQRQALYNFKFEGNSSLSSHIQNNPCAKFEVVFV 513